{"id":3915,"date":"2014-10-30T08:12:36","date_gmt":"2014-10-30T08:12:36","guid":{"rendered":"http:\/\/www.ipsych.me\/?p=3915"},"modified":"2014-10-30T08:40:24","modified_gmt":"2014-10-30T08:40:24","slug":"test","status":"publish","type":"post","link":"https:\/\/www.ipsych.me\/?p=3915","title":{"rendered":"Merging anatomical regions"},"content":{"rendered":"<h1 id=\"Programtoextractlookup-tablefromannotationfile\">Preparation<\/h1>\n<p class=\"line874\">1. Download the program for extract annotation table to LUT file.<\/p>\n<p class=\"line874\"><a href=\"http:\/\/www.ipsych.me\/wp-content\/uploads\/2014\/10\/GWFSAnnotToLUT.zip\">GWFSAnnotToLUT<\/a><\/p>\n<p class=\"line874\">\n<p class=\"line874\"><span id=\"line-240\" class=\"anchor\"><\/span>2. Extract the annotation file and save it as editable format.<\/p>\n<pre id=\"terminal\">  WFSAnnotToLUT annot_file_path output_file_path\r\n<\/pre>\n<p class=\"line874\">For example,<\/p>\n<pre id=\"terminal\">  GWFSAnnotToLUT\u00a0\/iPsych\/freesurfer\/subjects\/001\/label\/lh.aparc.annot\u00a0\u00a0\/iPsych\/freesurfer\/subjects\/001\/label\/lh.annot.txt\r\n<\/pre>\n<p class=\"line874\">*replace the\u00a0subject directory and subject numberings.<\/p>\n<p class=\"line874\">\n<h1 id=\"Programtoextractlookup-tablefromannotationfile\">Create new lookup table<\/h1>\n<p class=\"line874\">1. Follow the guides below.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Preparation 1. Download the program for extract annotation table to LUT file. GWFSAnnotToLUT 2. Extract the annotation file and save it as editable format. WFSAnnotToLUT annot_file_path output_file_path For example, GWFSAnnotToLUT\u00a0\/iPsych\/freesurfer\/subjects\/001\/label\/lh.aparc.annot\u00a0\u00a0\/iPsych\/freesurfer\/subjects\/001\/label\/lh.annot.txt *replace the\u00a0subject directory and subject numberings. Create new lookup table 1. Follow the guides below.<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[25,26],"tags":[],"class_list":["post-3915","post","type-post","status-publish","format-standard","hentry","category-affective-neuroscience","category-freesurfer"],"_links":{"self":[{"href":"https:\/\/www.ipsych.me\/index.php?rest_route=\/wp\/v2\/posts\/3915","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ipsych.me\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.ipsych.me\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.ipsych.me\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ipsych.me\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=3915"}],"version-history":[{"count":9,"href":"https:\/\/www.ipsych.me\/index.php?rest_route=\/wp\/v2\/posts\/3915\/revisions"}],"predecessor-version":[{"id":3925,"href":"https:\/\/www.ipsych.me\/index.php?rest_route=\/wp\/v2\/posts\/3915\/revisions\/3925"}],"wp:attachment":[{"href":"https:\/\/www.ipsych.me\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=3915"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.ipsych.me\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=3915"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.ipsych.me\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=3915"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}